| Spuyten Duyvil Creek | New York, NY | 16.2 miles | NE |
| Marquis Creek | Monmouth, NJ | 19.9 miles | SW |
| Martins Creek | Middlesex, NJ | 20.2 miles | SW |
| Big Mucks Creek | Queens, NY | 21.5 miles | SE |
| Jo Co Creek | Queens, NY | 21.9 miles | SE |
| Crooked Creek | Nassau, NY | 25.9 miles | SE |
| Black Point Creek | Monmouth, NJ | 26.6 miles | SE |
| Greenhaven Channel | Westchester, NY | 28.5 miles | NE |
| Town Neck Creek | Monmouth, NJ | 28.9 miles | SE |
| Oak Neck Creek | Nassau, NY | 33.3 miles | NE |
| Bush Creek | Nassau, NY | 34.3 miles | SE |
| Cheshires Creek | Nassau, NY | 37 miles | SE |
| Shark River Inlet | Monmouth, NJ | 38.9 miles | SE |
| Jonas Creek | Suffolk, NY | 40 miles | SE |
| The Gut | Fairfield, CT | 41.9 miles | NE |
| Sea Girt Inlet | Monmouth, NJ | 42.1 miles | SE |
| Fleets Cove | Suffolk, NY | 42.7 miles | NE |
| Farm Creek | Fairfield, CT | 44.5 miles | NE |
| Cooks Creek | Ocean, NJ | 44.5 miles | SE |
| Village Creek | Fairfield, CT | 45.9 miles | NE |
| Duck Creek | Mercer, NJ | 48.6 miles | SW |
| Grays Creek | Fairfield, CT | 49.4 miles | NE |
| Mill Creek | Fairfield, CT | 51.2 miles | NE |
| Mill Creek | Suffolk, NY | 52.2 miles | NE |
| West Meadow Creek | Suffolk, NY | 55.8 miles | NE |
| New Inlet (historical) | Ocean, NJ | 56.3 miles | SE |
| Lewis Gut | Fairfield, CT | 60.6 miles | NE |
| Haulover Creek | Cape May, NJ | 64 miles | SW |
| Turtle Creek | Ocean, NJ | 71.6 miles | SW |
| Log Creek | Ocean, NJ | 72.4 miles | SW |
| Farm River Gut | New Haven, CT | 77.6 miles | NE |
| Jimmies Creek | Ocean, NJ | 82.6 miles | SW |
| Big Sheepshead Creek | Ocean, NJ | 83.3 miles | SW |
| Little Sheepshead Creek | Ocean, NJ | 84.1 miles | SW |
| Big Graveling Creek | Atlantic, NJ | 84.3 miles | SW |
| Point Creek | Ocean, NJ | 84.9 miles | SW |
| Mattituck Inlet | Suffolk, NY | 86.5 miles | NE |
| Birch Creek | Gloucester, NJ | 91.5 miles | SW |
| Goldsmith Inlet | Suffolk, NY | 91.5 miles | NE |
| Little Panama | Atlantic, NJ | 93.9 miles | SW |
| Absecon Inlet | Atlantic, NJ | 94.9 miles | SW |
| Venice Lagoon | Atlantic, NJ | 95.4 miles | SW |
| Mud Creek | Suffolk, NY | 96.5 miles | NE |
| Turtle Gut | Atlantic, NJ | 97 miles | SW |
| Gardiners Creek | Suffolk, NY | 98.5 miles | NE |
| Going Through Creek | Atlantic, NJ | 101.7 miles | SW |
| The Dyke | New Castle, DE | 104.3 miles | SW |
| Gambles Gut | New Castle, DE | 107.1 miles | SW |
| Rattlesnake Gut | Cumberland, NJ | 109.3 miles | SW |
| Black Ditch | Salem, NJ | 110.5 miles | SW |
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